• MIST: The MITRE Identification Scrubber Toolkit
  • Getting started
  • Overview
  • System requirements, conventions, and installation instructions
    • Unix
    • MacOS X
    • Windows native
    • Cygwin
  • Browser requirements
  • Web server requirements
  • Working with the toolkit
  • Upgrade notes
  • MAT license
  • Bundle license
  • Deidentification customizations
  • General
  • HIPAA
  • AMIA
  • Tutorials
  • Tutorial 1: load and hand tag a document
  • Tutorial 2: build a model
  • Tutorial 3: automated tagging in the UI
  • Tutorial 4: view the Web demo
  • Tutorial 5: use the command line engine and scorer
  • Tutorial 6: workspaces
  • Tutorial 7: the experiment engine
  • Core annotation system
  • Tasks, annotations, workflows, and steps
  • Files and workspaces
  • Readers and writers
  • The default Carafe engine
  • The sample task
  • Web interface
    • Starting the Web server
    • Starting the UI
    • Using the UI
    • The UI logger
    • The UI and workspace security
  • The standalone viewer
  • Command-line tools
    • MATEngine
    • MATExperimentEngine
    • MATManagePluginDirs
    • MATModelBuilder
    • MATReport
    • MATRetokenize
    • MATScore
    • MATWeb
    • MATWorkspaceEngine
    • mat_controller.sh
  • File formats
    • Experiment engine XML reference
    • Experiment engine XML use cases
    • Viewing language data in CSV
  • Simple customizations
  • Creating a new task
  • Creating a new demo
  • File formats
    • Task XML reference
    • Task XML use cases
    • Demo XML reference
    • MAT JSON document format
  • Core developer documentation
  • Building from a CVS checkout
  • Core technologies
  • Customizing a task: advanced topics
  • Service API
  • Java API
    • Overview
    • Javadoc for java-mat-core library
    • Javadoc for java-mat-engine-client library
  • Creating a ZIP file
  • Command-line tools
    • build_tarball.py
    • redistribute.py
  • Version history
  • Known bugs
  • Testing
    • UI